| Manipulation | Mouse Action | Key | |
| Chemis3DApp | Chemis3D11 | ||
| MENU* | NS: double-click
IE: task bar |
Right click | [M] |
| Rotate | Left click drag | Left click drag MENU : Mouse > Rotate |
[R] |
| Zoom | Right click drag | MENU : Mouse > Zoom | [Z] |
| Translate | Ctrl + Left click drag | MENU : Mouse > Translate | [T] |
| Rotate X^Y | Shift + Left click drag | MENU : Mouse > Rotate XY | [X] |
| Menus | Options | Key Code | Actions |
| Style | Ball | [B] | Spherical atom representation (Van der Walls radi) |
| Ball & Stick | [K] | Atom and bond representation | |
| Stick | [S] | Stick Bond representation | |
| Wireframe | [W] | Multi-bonds wireframe representation | |
| Hydrogen | [H] | Add/Remove Hydrogen | |
| Color | Atom | [A] | CPK Atom Color Sheme |
| Group | [G] | Amino Acids and Nucleotides color scheme | |
| Chain | [C] | Protein and Nucleic Acid chains color scheme | |
| Options | Fastmove | [F] | Wireframe style on move (Toggle on/off) |
| Spin | [I] | Spin the model (Toggle on/off) | |
| Reset | [E] | Initial size and position | |
| Tools | Label | [L] | Label each atom |
| Pick | [P] | Select Atom Identity | |
| Distance | [D] | Measure interatomic distance | |
| Angle | [N] | Measure bonds angle | |
| Torsion | [W] | Measure dihedrale angle | |
| About | Molecule | [U] | Molecule name, number of atoms, bonds, groups |
| Chemis3D | [3] | Informations, Version and Copyright | |
| Quick Help | [Q] | Command List | |
| Full Help ? | [?] | Access to Chemis3D Web Site |